1.Write a Java program to read a file that contains DNA sequences of arbitrary length one per line (note that each DNA sequence is just a String). Your program should sort the sequences in descending order with respect to the number of 'TATA' subsequences present. Finally write the sequences in sorted order into another file.
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June 9, 2010 at 10:56 AM
Hi Friend,
Try the following code:
import java.io.*; import java.util.*; class ShowData implements Comparable { int id; String name; int marks; String grade;
public void setId(int id) { this.id = id; }
public int getId() { return id; }
public void setName(String name) { this.name = name; }
public String getName() { return name; }
public void setMarks(int marks) { this.marks = marks; }
public int getMarks() { return marks; }
public void setGrade(String grade) { this.grade = grade; }
public String getGrade() { return grade; }
public int compareTo(Object Student) throws ClassCastException { if (!(Student instanceof ShowData)) throw new ClassCastException("Error"); int ide = ((ShowData) Student).getId(); return this.id - ide; } }
June 9, 2010 at 10:56 AM
continue..
public class SortFileData { SortFileData() { int j = 0; ShowData data[] = new ShowData[5]; try { FileInputStream fstream = new FileInputStream("C:/school.txt"); DataInputStream in = new DataInputStream(fstream); BufferedReader br = new BufferedReader(new InputStreamReader(in)); String strLine; ArrayList list = new ArrayList(); while ((strLine = br.readLine()) != null) { list.add(strLine); } Iterator itr; for (itr = list.iterator(); itr.hasNext();) { String str = itr.next().toString(); String[] splitSt = str.split(" "); String id = "", name = "", marks = "", grade = ""; for (int i = 0; i < splitSt.length; i++) { id = splitSt[0]; name = splitSt[1]; marks = splitSt[2]; grade = splitSt[3]; } data[j] = new ShowData(); data[j].setId(Integer.parseInt(id)); data[j].setName(name); data[j].setMarks(Integer.parseInt(marks)); data[j].setGrade(grade); j++; } Arrays.sort(data); List l=Arrays.asList(data); Collections.sort(l).reverse(l); File file = new File("C:/new.txt"); FileWriter fw = new FileWriter(file,true); BufferedWriter out = new BufferedWriter(fw); System.out.println("********Sorted by id********"); String strVal = ""; for (int i = 0; i < 5; i++) { ShowData show = data[i]; int no = show.getId(); String name = show.getName(); int marks = show.getMarks(); String grade = show.getGrade(); System.out.println(no + " " + name + " " + marks + " "+ grade); String d = no + " " + name + " " + marks + " " + grade; ArrayList al = new ArrayList(); al.add(d + "\n"); Iterator itr1 = al.iterator(); while (itr1.hasNext()) { out.write(itr1.next().toString()); out.newLine(); } } out.close(); } catch (Exception e) { } } public static void main(String[] args) { SortFileData data = new SortFileData(); } }
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